MacVector

MacVector provides numerous functions for DNA and protein analysis, including sequence editing, primer design, internet database searching, protein analysis, multiple sequence alignment, phylogenetic reconstruction, coding region analysis, and agarose gel simulation.

Lasergene

DNASTAR's Lasergene Molecular Biology Suite is our comprehensive package of molecular biology software, meeting all of your sequence analysis needs. Supported workflows include performing multiple and pairwise sequence alignments, identifying genes, assembling contigs of Sanger sequences, creating virtual clones, designing primers, and more.

LabArchives

LabArchives is a secure, cloud-based electronic lab notebook (ELN) designed for research. This ELN system enables researchers to capture, manage, store, and share information and data. LabArchives facilitates collaboration amongst researchers within a loab, institution, and with external stakeholders.

i2b2

i2b2 enables researchers to discover cohorts of patients using data from EHR systems.  Through a point-and-click interface, researchers can build queries drawing from demographics, diagnoses, procedures, medications, and results recorded in Epic, the EHR system of Weill Cornell Physician Organization outpatient clinics (access to data from Eclipsys/Allscripts Sunrise Clinical Manager, the EHR system of NewYork-Presbyterian inpatient units, is planned).  i2b2 supports different types of queries of clinical data, including whether clinical concepts occurred at any point in a patient’s medical

FlowJo

The FlowJo workspace is a powerful statistical environment that is used for immunophenotyping, cell cycle, proliferation, kinetics studies, quantitative population comparison, or plate screening assays.

Annual license cost is determined by the number of active users each quarter. Thus we can only provide an estimate of the cost based on current usage.

Endnote

Endnote is a bibliographic management tool for storing and accessing shared references, documents and files. Endnote allows the autmated insertion of citations in MS Word in over 6000 styles. Endnote can retrieve the full text of all articles in your library from freely available sources and the Samuel J. Wood library's subscriptions.

DESeq2

Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution. Available through the bioconductor package in R

Cytoscape

Cytoscape is an open source software platform for visualizing molecular interaction networks and biological pathways and integrating these networks with annotations, gene expression profiles and other state data.